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朱一亨

作者:    来源:    发布时间:2023-09-12    点击量:

         南京农业大学人工智能学院师资队伍(个人信息)

朱一亨

工学博士

讲师

(系别)

计算机系

E-mail

yihzhu@njau.edu.cn

通信地址

南京市浦口区点将台南京农业大学浦口校区5号楼215室

个人简介

˜教育经历

2011.09-2015.06,南京工程学院,计算机科学与技术,工学学士

2015.09-2023.04,南京理工大学,控制科学与工程,工学博士

2019.12-2021.12,密歇根大学安娜堡分校,计算医学与生物信息学,联合培养博士研究生

˜工作经历

2023.08-至今,南京农业大学人工智能学院,讲师

研究领域

模式识别与生物信息学、蛋白质结构和功能预测

教授课程

VB.NET程序设计

承担项目

1. 国家自然科学基金-面上项目,高精度多视角蛋白质功能预测研究,No. 62372234,参与

2. 国家自然科学基金-面上项目,高精度多尺度蛋白质残基接触图及距离图预测研究,No. 62072243,参与

3. 国家自然科学基金-面上项目,大规模多源异质蛋白质数据挖掘中的若干关键问题研究,No. 61772273,参与

学术成果

(论文、专利、软著等)

1.Yi-Heng Zhu, Chengxin Zhang, Dong-Jun Yu, Yang Zhang. Integrating Unsupervised Language Model with Triplet Neural Networks for Protein Gene Ontology Prediction. PLOS Computational Biology. 2022.

2.Yi-Heng Zhu, Chengxin Zhang, Yan Liu, Gilbert Omenn, Peter Freddolino, Dong-Jun Yu, Yang Zhang. Integrating Transcript Expression Profiles with Protein Homology Inferences for Gene Function Prediction. Genomics, Proteomics & Bioinformatics. 2022.

3.Yi-Heng Zhu, Jun Hu, Fang Ge, Fuyi Li, Jiangning Song, Yang Zhang, Dong-Jun Yu. Accurate Multi-Stage Prediction of Protein Crystallization Propensity Using Deep-Cascade Forest with Sequence-Based Features. Briefings in Bioinformatics. 2020.

4.Yi-Heng Zhu, Jun Hu, Xiao-Ning Song, Dong-Jun Yu. DNAPred: Accurate Identification of DNA-binding Sites from Protein Sequence by Ensembled Hyperplane-Distance-Based Support Vector Machines. Journal of Chemical Information and Modeling. 2019.

5.Yi-Heng Zhu, Jun Hu, Yong Qi, Xiao-Ning Song, Dong-Jun Yu. Boosting Granular Support Vector Machines for the Accurate Prediction of Protein-Nucleotide Binding Sites. Combinatorial Chemistry & High Throughput Screening. 2019.

6.Yi-Heng Zhu, Chengxin Zhang, Rucheng Diao, Xiaogen Zhou, Peter Freddolino, Dong-Jun Yu, Yang Zhang. MetaGOPlus: Improving Gene Ontology Prediction of Proteins Using Deep Residual Network with Hierarchical Classification. The 28th Conference on Intelligent Systems for Molecular Biology (ISMB 2020,Poster).

7. Peng-Hao Wang#,Yi-Heng Zhu#, Xibei Yang, Dong-Jun Yu. GCmapCrys: Integrating graph attention network with predicted contact map for multi-stage protein crystallization propensity prediction. Analytical Biochemistry. 2023.

8. Zi Liu#,Yi-Heng Zhu#, Long-Chen Shen, Xuan Xiao, Wang-Ren Qiu, Dong-Jun Yu. Integrating Unsupervised Language Model with Multi-View Multiple Sequence Alignments for High-Accuracy Inter-Chain Contact Prediction. Computers in Biology and Medicine. (Under Review)

9.Yi-Heng Zhu, Zi Liu, Zhiwei Ji, Dong-Jun Yu. ULDNA: Integrating Unsupervised Multi-Source Language Models with LSTM-Attention Network for High-Accuracy Protein-DNA Binding Site Prediction. Briefings in Bioinformatics. (Under Review)

奖励荣誉

2019-2021:中国国家留学基金委奖学金

社会兼职

担任以下SCI期刊审稿人:

1.Briefings in Bioinformatics

2. IEEE-ACM Transactions on Computational Biology and Bioinformatics

3. BMC Bioinformatics

4. Science Reports

5. Computational and Structural Biotechnology Journal